Hi all, The e-mail questions from me continue. :) I have a quick question about indirect labeling of antibodies when using two indirect staining antibodies. We have a researcher who is working with CD44 and CD117 staining in human ovarian cancer cells. We've done sorting for them on these before, but I just want to help them make sure they are getting the best staining possible. We can visualize CD44 well for the most part, but the CD117 seems very dim, not much of it, and minimal separation. The fluorophore choices seem to be minimal with these, too. They are using the following combination of antibodies, and received their protocol from someone doing similar research: rat anti-mouse CD44 chicken anti-rat IgG-PE mouse anti-CD117 goat anti-mouse IgG-FITC So - my inquiry is broken down into bits: 1 - Is labeling with two indirectly labeled antibodies wise? What are the pitfalls? 2 - What's the likelihood these Abs are going to/are reacting non-specifically? 3 - When using a protocol, can you throw both primary antibodies at the same time, wash X amount of times, and then add both secondaries at the same time? Or is that in general, a bad idea? Currently the researcher is labeling with one primary, washing, labeling with the other primary, washing, then same thing for the secondaries. Oh, and blocking with 1% BSA initially. 4 - Would primary Abs to CD44 and CD117 be a wiser decision? Also - the researcher is working with human cells first, then injecting into mice, which is one reason that they are using mouse/rat Abs. There are human direct Abs to each CD44 and CD117 - but would the cross reactivity decrease? Supposedly these mouse/rat Abs cross-react well with the human cells, but that's per the manufacturer. There are also mouse Abs to CD117 and CD44, but can anyone tell me if the cross-reactivity would be sufficient? Thanks again for all your help! The flow list is an awesome resource! Hopefully some day I will be able to contribute as much as many of you do in answering questions! Best, ChristianeReceived on Fri May 9 14:18:00 2008
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