Dear Janet, the "debris" are myelin/fat vakuoles from the brain. The only way to get a bit rid of it is a good percoll densitiy separation. Always use 30 um filters before sorting samples. Be not disappointed, there are few cells in the brain - most part is fat/myelin. You can perfectly separate the cells when you include a Hoechst/PI combination for myelin/dead versus live cell discrimination. I will attach you a sample from human brain (Hoechst x axis, PJ y axis), it is similar to mouse brain. But the amount of myelin varies considerably if you take lateral ventricle, cortex etc. Hope that helps. Best regards Conny Dr. Cornelia Brendel Klinik für Hämatologie, Onkologie, Immunologie Universitätsklinikum Gießen und Marburg GmbH, Standort Marburg Baldingerstraße D-35043 Marburg Telefon (+49) 06421 - 286 5061 Telefax (+49) 06421 - 286 5062 E-Mail: Brendelc@mailer.uni-marburg.de url: http://www.med.uni-marburg.de Aufsichtsratsvorsitzender: Wolfgang Pföhler Geschäftsführung: Gerald Meder (Vors.), Prof. Dr. Werner Seeger (stv. Vors.), Manfred Wiehl, Dr. Peter Mein, Prof. Dr. Martin Hansis (stv.), Dr. Hans-Jürgen Hackenberg (stv.) Sitz der Gesellschaft: Gießen Amtsgericht Gießen HRB 6384 Email: BrendelC@mailer.uni-marburg.de Zitat von janet dow <jldow@unity.ncsu.edu>: > Dear Fellow FLOWers: > > I have a client who comes to me to sort disassociated embryonic mouse > brains that have been transfected with GFP. I am having real > problems with the sorts as the samples contain large amounts of > cellular debris as a result of the disassociation process. The client > washes the samples multiple times trying to get rid of this debris > with no success. > > As a result, my sorter lines are being clogged, and I must stop the > sort multiple times to backflush the sample lines(this last sort I > had to stop 10 times). I am certain the debris is causing the cells > to clump and/or stick to the sample tubing. > > I would be grateful to hear from anyone who may be doing similar > samples with suggestions as to how we might stop this > clumping/stickiness from disrupting the sort. > > I am using a MoFlo with a 100 um tip running at 30 psi and am using a > SmartSampler. My stream stays remarkable stable during the sort, so > I am thinking it is the sample tubing that is being clogged. The > sample is put thru a 35um mesh before sorting to eliminate large > clumps. The sample is kept at cold during the sort. > > Thank you in advance for all the advice. > > Sincerely, > > Janet Dow > -- > Janet Dow > Research Specialist and Manager > Flow Cytometry and Cell Sorting Facility > North Carolina State College of Veterinary Medicine > 4700 Hillsborough Street > Room C-309 > Raleigh, NC 27606 > (919)513-6443 > ---------------------------------------------------------------- This message was sent using IMP, the Internet Messaging Program. This attachment - 'human brain.jpg' - 127.20 KBytes - can be viewed at http://www.cyto.purdue.edu/MD-parts/92a74c7d4f632d78bfcd2c3fe84fc744ecf58fc9.jpg This attachment - 'human brain.jpg' - 127.20 KBytes - can be viewed at http://www.cyto.purdue.edu/MD-parts/92a74c7d4f632d78bfcd2c3fe84fc744ecf58fc9.jpgReceived on Wed May 7 15:38:00 2008
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