Quantitating DNA

From: Jonni S. Moore <moorej@mail.MED.UPENN.EDU>
Date: Wed Jul 13 2005 - 10:55:27 EST
Dear Flow Folks,

We have a user who has posed the following project:

Brief Description of Experiment:
I have a suspension of monodisperse microspheres, one micron in diameter. Each
sphere has identical DNA strands grafted to its surface. I need to determine
the absolute number of DNA's per sphere. I am currently using DNA that has a
single FITC molecule attached to each DNA strand. How accurately can the flow
cytometer determine the absolute number of DNA's per sphere? I should also note
that my samples have approximately 10000 DNA's per sphere. How low in 
number can
I go before the cytometer gives poor results?

Aside from the usual issues of standardizing for quantitative 
measurements, would any of you have any advice.  What would you say 
would be the fewest number of FITC molecules that one could detect on 
a standard tabletop instrument.  I am a little uncomfortable with 
committing to this level of sensitivity, especially with FITC..

Thoughts!!

thanks, Jonni
-- 
Jonni S. Moore, Ph.D.
Associate Professor of Pathology and Laboratory Medicine
Director, PATH BioRESOURCE
Director, Flow Cytometry and Cell Sorting Shared Resource, Abramson 
Cancer Center
Director, Clinical Flow Cytometry, Hospital of the University of Pennsylvania
University of Pennsylvania School of Medicine
220 John Morgan Bldg.
Philadelphia, PA  19104-6082
Phone:	215-898-6853
FAX:	215-898-0734
Received on Wed Jul 13 13:58:00 2005

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